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DiseaseEnhancer Version 1.0.2
| Title | Description | Files |
|---|---|---|
| Disease-associated enhancer pairs curated from literatures: |
This file contains 1059 disease-associated enhancers in 167 human disease, involving 395 target genes. Sorted by disease name.
- id: unique identifier for each enhancer in DiseaseEnhancer database - chr, start, end: genomic location of disease enhancers. - DiseaseType: the disease which disease-associated enhancer involved in. - TargetGene: The gene targeted by disease-associated enhancer, veritified by 3C-like experiments, or gene pertubation experiments, or bioinfomatics methods. |
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| The mutation information annotated for disease-associated enhancer: |
This file contains the curated annotation of the variants on the disease-associated enhancers, involving 1935 enhancer-associated variants. Sorted by target gene name.
- id: unique identifier for each enhancer in DiseaseEnhancer database - VariantType: the genetic variant type, including SNP, CNV, mutation, indel, rearrangement and SV. - VariantName: the genetic variant which change the disease enhancer state. - chr, start, end: genomic location of the risk genetic variants. - TargetGene: The gene targeted by disease-associated enhancer, veritified by 3C-like experiments, or gene pertubation experiments, or bioinfomatics methods. - MutationType: the change in DNA sequence by the genetic variant, for example, a C to T transition. - VariantConsequence: the change in enhancer activity and the affected TF bindings. - PMID: the PubMed ID of all references. |
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| The information annotated for enhancer-target: |
This file contains 803 unique enhancer-gene interactions, ignoring disease types. Sorted by disease name.
- id: unique identifier for each enhancer in DiseaseEnhancer database. - chr, start, end: genomic location of disease enhancers. - TargetGene: The gene targeted by disease-associated enhancer, veritified by 3C-like experiments, gene pertubation experiments, or bioinfomatics methods. |
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DiseaseEnhancer Version 1.0.1
| Title | Description | Files |
|---|---|---|
| Disease-associated enhancer pairs curated from literatures: |
This file contains 847 disease-associated enhancers in 143 human disease, involving 308 target genes. Sorted by disease name.The information of each entry arranged as described above. |
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| The mutation information annotated for disease-associated enhancer: |
This file contains the curated annotation of the variants on the disease-associated enhancers, involving 1450 enhancer-associated variants. Sorted by target gene name.The information of each entry arranged as described above. |
Download |
| The information annotated for enhancer-target: |
This file contains 603 unique enhancer-gene interactions, ignoring disease types. Sorted by disease name.The information of each entry arranged as described above. |
Download |