In this page, users can browse the functional states atlas of all cancer cells and view the detailed dataset information.

Please select a cancer type of interest on the cancer-dataset hierarchical navigation menu to browse the functional states profiles. And selected a dataset to view its detailed information.

• Acute lymphoblastic leukemia
  Booth CAG.Cancer Cell. 2018 (ALL Cell Lines)Ebinger S. Cancer Cell. 2016 (PDX)
• Acute myeloid leukemia
  Lynn Quek. 2016 (Bone marrow)Fan J. Genome Res. 2018 (Bone marrow_10X)Fan J. Genome Res. 2018 (Bone marrow_Smart)Li S. Nat Med. 2016 (Bone marrow)
• Alveolar rhabdomyosarcoma
  Chen W. Genome Biol. 2018 (Rh41)
• Astrocytoma
  Venteicher AS. Science. 2017 (Brain)
• Breast cancer
  Arindam Banerjee. Oncotarget. 2018 (MDA-MB-231)Hafner M.Nat Methods.2016 (BRCA Cell Lines)Yeakley JM. PLoS One. 2017 (MCF-7)Yeakley JM. PLoS One. 2017 (MDA-MB-231)Braune EB. Stem Cell Reports. 2016 (PDX)Chung W. Nat Commun. 2017 (Breast)Jordan NV. Nature. 2016 (CTC)Aceto N. Mol Cancer Res. 2018 (CTC)
• Bronchoalveolar carcinoma
  Yukie Kashima. Scientific Report. 2018 (H1650)
• Cervix cancer
  Aaron TL Lun. Nucleic Acids Res. 2018 (Hela)Hennig BP. G3 (Bethesda). 2018 (Hela)
• Chronic myelogenous leukemia
  Klein AM. Cell. 2015 (K562)Attar M. Sci Rep. 2018 (K562)Giustacchini A. Nat Med. 2017 (K562)Kind J. Cell. 2015 (KBM7)Guillaumet-Adkins A. Genome Biol. 2017 (K562)Li H. Nat Genet. 2017 (K562)Aarts M. Genes Dev. 2017 (K562)Giustacchini A. Nat Med. 2017 (Bone marrow)
• Colorectal cancer
  Wu AR. Nat Methods. 2014 (HCT-116)Li H. Nat Genet. 2017 (HCT-116)Li H. Nat Genet. 2017 (Colon)
• Esophageal squamous cell carcinoma
  Ling Yang. 2018 (KYSE-180)
• Glioblastoma
  Patel AP. Science. 2014 (GBM Cell Lines)Bose S.Genome Biol. 2015 (U-87)Darmanis S. Cell Rep. 2017 (Brain)Patel AP. Science. 2014 (Brain)
• Glioma
  Filbin MG.Science. 2018 (Cell Culture)Filbin MG. Science. 2018 (Brain)Filbin MG. Science. 2018 (PDX)
• Head and neck cancer
  Puram SV. Cell. 2017 (Oral Cavity)
• Hepatocellular carcinoma
  Zheng H. Hepatology. 2018 (HuH-7)Zheng H. Hepatology. 2018 (HuH-1)Hou Y. Cell Res. 2016 (Liver)
• High-grade glioma
  Yuan J. bioRxiv. 2018 (Brain)
• Lung adenocarcinoma
  Suzuki A. Genome Biol. 2015 (LC-2/ad)Tsukasa Kouno.biorxiv. 2018 (A549)Yukie Kashima. Scientific Report. 2018 (II18)Li H. Nat Genet. 2017 (A594)Kim KT. Genome Biol. 2015 (H358)Suzuki A. Genome Biol. 2015 (PC-9)Suzuki A. Genome Biol. 2015 (VMRC-LCD)Kim KT. Genome Biol. 2015 (PDX)Guillaumet-Adkins A. Genome Biol. 2017 (PDX_LUAD)
• Melanoma
  Torre EA. Cell Syst. 2018 (WM989)Shaffer SM. Nature. 2017 (WM983B)Shaffer SM. Nature. 2017 (WM989)Tirosh I. Science. 2016 (Skin)Gerber T. Oncotarget. 2017 (Skin)
• Myxoid liposarcoma
  Karlsson J. J Mol Biol. 2017 (MLS 1765-92)
• Neuroblastoma
  Boeva V. Nat Genet. 2017 (Cell Line)
• Non-small cell lung cancer
  Yukie Kashima. Scientific Report. 2018 (PC-9)Yukie Kashima. Scientific Report. 2018 (H1975)Yukie Kashima. Scientific Report. 2018 (H2228)Li H. Nat Genet. 2017 (H1437)Lambrechts D. Nat Med. 2018 (Lung)
• Oligodendroglioma
  Tirosh I. Nature. 2016 (Brain)
• Ovarian carcinoma
  Guillaumet-Adkins A. Genome Biol. 2017 (PDX_OV)
• Pancreatic ductal adenocarcinoma
  Shah F. Mol Oncol. 2017 (Cell Line)
• Prostate cancer
  Horning AM. Cancer Res. 2018 (LNCaP)Miyamoto DT. Science. 2015 (Cell Lines)Miyamoto DT. Science. 2015 (CTC)
• Renal cell carcinoma
  Kim KT. Genome Biol. 2016 (PDX)Kim KT. Genome Biol. 2016 (Kidney)
• Retinoblastoma
  Liu H. PNAS. 2020 (Organoid)
• Uveal melanoma
  Durante MA. Nat Commun. 2020 (Eye)